WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G7B.17.1 Sequence Name  Y17G7B.17.1
Length (nt)  1225   Chromosome Location  II: 12092419-12099989
Chromosome . Primary Identifier  II Chromosome Location . Start  12092419
Chromosome Location . End  12099989 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G7B.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012468 Y17G7B.17 Y17G7B.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.17 Y17G7B.17 882   II: 12092689-12092803

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.17.1 12092419 12099989 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70935   385   II: 12092419-12092803 Caenorhabditis elegans
Exon70939   226   II: 12093653-12093878 Caenorhabditis elegans
Exon70941   134   II: 12097277-12097410 Caenorhabditis elegans
Exon70943   137   II: 12097701-12097837 Caenorhabditis elegans
Exon70945   220   II: 12098788-12099007 Caenorhabditis elegans
Exon70947   123   II: 12099867-12099989 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.17.1 12092419 12099989 -1

1 Sequence

Length
1225

1 Sequence Ontology Term

Identifier Name Description
transcript