WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.5.1 Sequence Name  Y57A10A.5.1
Length (nt)  1982   Chromosome Location  II: 12154486-12156812
Chromosome . Primary Identifier  II Chromosome Location . Start  12154486
Chromosome Location . End  12156812 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013250 Y57A10A.5 Y57A10A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.5 Y57A10A.5 1716   II: 12154512-12154663

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.5.1 12154486 12156812 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71050   178   II: 12154486-12154663 Caenorhabditis elegans
Exon71051   114   II: 12154707-12154820 Caenorhabditis elegans
Exon71052   279   II: 12154870-12155148 Caenorhabditis elegans
Exon71053   114   II: 12155192-12155305 Caenorhabditis elegans
Exon71054   198   II: 12155353-12155550 Caenorhabditis elegans
Exon71055   571   II: 12155612-12156182 Caenorhabditis elegans
Exon71056   225   II: 12156241-12156465 Caenorhabditis elegans
Exon71057   303   II: 12156510-12156812 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.5.1 12154486 12156812 1

1 Sequence

Length
1982

1 Sequence Ontology Term

Identifier Name Description
transcript