WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.15.1 Sequence Name  Y57A10A.15.1
Length (nt)  3310   Chromosome Location  II: 12189789-12199962
Chromosome . Primary Identifier  II Chromosome Location . Start  12189789
Chromosome Location . End  12199962 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013258 polg-1 Y57A10A.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.15 Y57A10A.15 3219   II: 12189877-12190029

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.15.1 12189789 12199962 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71110   241   II: 12189789-12190029 Caenorhabditis elegans
Exon71111   228   II: 12190233-12190460 Caenorhabditis elegans
Exon71113   301   II: 12191286-12191586 Caenorhabditis elegans
Exon71114   403   II: 12192842-12193244 Caenorhabditis elegans
Exon71115   371   II: 12193988-12194358 Caenorhabditis elegans
Exon71116   549   II: 12195450-12195998 Caenorhabditis elegans
Exon71117   358   II: 12197595-12197952 Caenorhabditis elegans
Exon71118   85   II: 12198079-12198163 Caenorhabditis elegans
Exon71119   453   II: 12198938-12199390 Caenorhabditis elegans
Exon71120   321   II: 12199642-12199962 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.15.1 12189789 12199962 -1

1 Sequence

Length
3310

1 Sequence Ontology Term

Identifier Name Description
transcript