WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.16.1 Sequence Name  Y57A10A.16.1
Length (nt)  650   Chromosome Location  II: 12200629-12202381
Chromosome . Primary Identifier  II Chromosome Location . Start  12200629
Chromosome Location . End  12202381 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013259 trpp-5 Y57A10A.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.16 Y57A10A.16 558   II: 12200717-12200833

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.16.1 12200629 12202381 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71121   205   II: 12200629-12200833 Caenorhabditis elegans
Exon71122   113   II: 12201147-12201259 Caenorhabditis elegans
Exon71123   332   II: 12202050-12202381 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.16.1 12200629 12202381 -1

1 Sequence

Length
650

1 Sequence Ontology Term

Identifier Name Description
transcript