WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.35.1 Sequence Name  Y57A10A.35.1
Length (nt)  890   Chromosome Location  II: 12203221-12209166
Chromosome . Primary Identifier  II Chromosome Location . Start  12203221
Chromosome Location . End  12209166 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.35.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013272 aqp-12 Y57A10A.35 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.35 Y57A10A.35 732   II: 12203309-12203417

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.35.1 12203221 12209166 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71124   197   II: 12203221-12203417 Caenorhabditis elegans
Exon71125   120   II: 12205016-12205135 Caenorhabditis elegans
Exon71126   197   II: 12205942-12206138 Caenorhabditis elegans
Exon71127   90   II: 12206423-12206512 Caenorhabditis elegans
Exon71128   179   II: 12207754-12207932 Caenorhabditis elegans
Exon71129   107   II: 12209060-12209166 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.35.1 12203221 12209166 1

1 Sequence

Length
890

1 Sequence Ontology Term

Identifier Name Description
transcript