WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.19.1 Sequence Name  Y57A10A.19.1
Length (nt)  2265   Chromosome Location  II: 12225356-12228208
Chromosome . Primary Identifier  II Chromosome Location . Start  12225356
Chromosome Location . End  12228208 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.19.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013260 rsr-2 Y57A10A.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.19 Y57A10A.19 1278   II: 12225358-12225447

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.19.1 12225356 12228208 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71219   92   II: 12225356-12225447 Caenorhabditis elegans
Exon71220   981   II: 12225596-12226576 Caenorhabditis elegans
Exon71221   1192   II: 12227017-12228208 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.19.1 12225356 12228208 1

1 Sequence

Length
2265

1 Sequence Ontology Term

Identifier Name Description
transcript