WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.24.1 Sequence Name  Y57A10A.24.1
Length (nt)  1706   Chromosome Location  II: 12242946-12247629
Chromosome . Primary Identifier  II Chromosome Location . Start  12242946
Chromosome Location . End  12247629 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.24.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013264 Y57A10A.24 Y57A10A.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.24 Y57A10A.24 1563   II: 12242995-12243257

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.24.1 12242946 12247629 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71237   312   II: 12242946-12243257 Caenorhabditis elegans
Exon71238   120   II: 12243966-12244085 Caenorhabditis elegans
Exon71239   186   II: 12244190-12244375 Caenorhabditis elegans
Exon71240   135   II: 12244941-12245075 Caenorhabditis elegans
Exon71241   207   II: 12245276-12245482 Caenorhabditis elegans
Exon71242   110   II: 12246142-12246251 Caenorhabditis elegans
Exon71243   115   II: 12246312-12246426 Caenorhabditis elegans
Exon71244   345   II: 12246916-12247260 Caenorhabditis elegans
Exon71245   176   II: 12247454-12247629 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.24.1 12242946 12247629 1

1 Sequence

Length
1706

1 Sequence Ontology Term

Identifier Name Description
transcript