WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.25.1 Sequence Name  Y57A10A.25.1
Length (nt)  1711   Chromosome Location  II: 12251726-12256628
Chromosome . Primary Identifier  II Chromosome Location . Start  12251726
Chromosome Location . End  12256628 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.25.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013265 parn-2 Y57A10A.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.25 Y57A10A.25 1473   II: 12251963-12252166

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.25.1 12251726 12256628 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71248   441   II: 12251726-12252166 Caenorhabditis elegans
Exon71249   538   II: 12253170-12253707 Caenorhabditis elegans
Exon71250   465   II: 12254961-12255425 Caenorhabditis elegans
Exon71251   267   II: 12256362-12256628 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.25.1 12251726 12256628 -1

1 Sequence

Length
1711

1 Sequence Ontology Term

Identifier Name Description
transcript