WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.10.1 Sequence Name  Y57A10A.10.1
Length (nt)  1767   Chromosome Location  II: 12256852-12266245
Chromosome . Primary Identifier  II Chromosome Location . Start  12256852
Chromosome Location . End  12266245 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013255 tric-1B.1 Y57A10A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.10 Y57A10A.10 888   II: 12257707-12257928

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.10.1 12256852 12266245 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71252   1077   II: 12256852-12257928 Caenorhabditis elegans
Exon71253   555   II: 12258835-12259389 Caenorhabditis elegans
Exon71259   135   II: 12266111-12266245 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.10.1 12256852 12266245 -1

1 Sequence

Length
1767

1 Sequence Ontology Term

Identifier Name Description
transcript