WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.27.1 Sequence Name  Y57A10A.27.1
Length (nt)  1373   Chromosome Location  II: 12269795-12275044
Chromosome . Primary Identifier  II Chromosome Location . Start  12269795
Chromosome Location . End  12275044 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.27.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013267 Y57A10A.27 Y57A10A.27 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.27 Y57A10A.27 1167   II: 12270000-12270119

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.27.1 12269795 12275044 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71261   325   II: 12269795-12270119 Caenorhabditis elegans
Exon71262   286   II: 12271156-12271441 Caenorhabditis elegans
Exon71263   492   II: 12273142-12273633 Caenorhabditis elegans
Exon71264   270   II: 12274775-12275044 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.27.1 12269795 12275044 -1

1 Sequence

Length
1373

1 Sequence Ontology Term

Identifier Name Description
transcript