WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.30.1 Sequence Name  Y57A10A.30.1
Length (nt)  848   Chromosome Location  II: 12280660-12284139
Chromosome . Primary Identifier  II Chromosome Location . Start  12280660
Chromosome Location . End  12284139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.30.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002063 ife-5 Y57A10A.30 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.30 Y57A10A.30 606   II: 12283363-12283817

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.30.1 12280660 12284139 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71272   121   II: 12280660-12280780 Caenorhabditis elegans
Exon71274   458   II: 12283360-12283817 Caenorhabditis elegans
Exon71276   269   II: 12283871-12284139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.30.1 12280660 12284139 1

1 Sequence

Length
848

1 Sequence Ontology Term

Identifier Name Description
transcript