WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50E10.8.1 Sequence Name  C50E10.8.1
Length (nt)  1446   Chromosome Location  II: 12324459-12327565
Chromosome . Primary Identifier  II Chromosome Location . Start  12324459
Chromosome Location . End  12327565 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50E10.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016831 sre-56 C50E10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50E10.8 C50E10.8 1089   II: 12325544-12326299

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50E10.8.1 12324459 12327565 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71367   296   II: 12324459-12324754 Caenorhabditis elegans
Exon71368   766   II: 12325534-12326299 Caenorhabditis elegans
Exon71370   134   II: 12327122-12327255 Caenorhabditis elegans
Exon71371   250   II: 12327316-12327565 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50E10.8.1 12324459 12327565 1

1 Sequence

Length
1446

1 Sequence Ontology Term

Identifier Name Description
transcript