WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10B.1.1 Sequence Name  Y57A10B.1.1
Length (nt)  2139   Chromosome Location  II: 12358692-12379530
Chromosome . Primary Identifier  II Chromosome Location . Start  12358692
Chromosome Location . End  12379530 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10B.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013273 marc-5 Y57A10B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10B.1 Y57A10B.1 1806   II: 12359006-12359070

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10B.1.1 12358692 12379530 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71424   379   II: 12358692-12359070 Caenorhabditis elegans
Exon71425   133   II: 12360431-12360563 Caenorhabditis elegans
Exon71426   140   II: 12361543-12361682 Caenorhabditis elegans
Exon71427   134   II: 12361826-12361959 Caenorhabditis elegans
Exon71428   167   II: 12362086-12362252 Caenorhabditis elegans
Exon71429   90   II: 12362307-12362396 Caenorhabditis elegans
Exon71432   174   II: 12362622-12362795 Caenorhabditis elegans
Exon71435   110   II: 12364405-12364514 Caenorhabditis elegans
Exon71436   186   II: 12365439-12365624 Caenorhabditis elegans
Exon71437   214   II: 12366810-12367023 Caenorhabditis elegans
Exon71438   96   II: 12376456-12376551 Caenorhabditis elegans
Exon71439   86   II: 12377032-12377117 Caenorhabditis elegans
Exon71440   151   II: 12379232-12379382 Caenorhabditis elegans
Exon71441   79   II: 12379452-12379530 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10B.1.1 12358692 12379530 -1

1 Sequence

Length
2139

1 Sequence Ontology Term

Identifier Name Description
transcript