WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10B.4.1 Sequence Name  Y57A10B.4.1
Length (nt)  1119   Chromosome Location  II: 12384593-12386881
Chromosome . Primary Identifier  II Chromosome Location . Start  12384593
Chromosome Location . End  12386881 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10B.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013276 sre-42 Y57A10B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10B.4 Y57A10B.4 1083   II: 12384629-12384818

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10B.4.1 12384593 12386881 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71446   226   II: 12384593-12384818 Caenorhabditis elegans
Exon71447   134   II: 12385249-12385382 Caenorhabditis elegans
Exon71448   283   II: 12385536-12385818 Caenorhabditis elegans
Exon71449   476   II: 12386406-12386881 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10B.4.1 12384593 12386881 -1

1 Sequence

Length
1119

1 Sequence Ontology Term

Identifier Name Description
transcript