WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10B.5.1 Sequence Name  Y57A10B.5.1
Length (nt)  1115   Chromosome Location  II: 12388280-12389858
Chromosome . Primary Identifier  II Chromosome Location . Start  12388280
Chromosome Location . End  12389858 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10B.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013277 sre-41 Y57A10B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10B.5 Y57A10B.5 1083   II: 12388293-12388768

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10B.5.1 12388280 12389858 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71450   489   II: 12388280-12388768 Caenorhabditis elegans
Exon71452   283   II: 12388950-12389232 Caenorhabditis elegans
Exon71453   134   II: 12389460-12389593 Caenorhabditis elegans
Exon71454   209   II: 12389650-12389858 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10B.5.1 12388280 12389858 1

1 Sequence

Length
1115

1 Sequence Ontology Term

Identifier Name Description
transcript