WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57G9.1.1 Sequence Name  F57G9.1.1
Length (nt)  1180   Chromosome Location  II: 12406822-12408817
Chromosome . Primary Identifier  II Chromosome Location . Start  12406822
Chromosome Location . End  12408817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57G9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010217 sre-31 F57G9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57G9.1 F57G9.1 1074   II: 12406928-12407132

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57G9.1.1 12406822 12408817 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71483   311   II: 12406822-12407132 Caenorhabditis elegans
Exon71484   125   II: 12407551-12407675 Caenorhabditis elegans
Exon71485   123   II: 12407728-12407850 Caenorhabditis elegans
Exon71486   157   II: 12408118-12408274 Caenorhabditis elegans
Exon71487   464   II: 12408354-12408817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57G9.1.1 12406822 12408817 -1

1 Sequence

Length
1180

1 Sequence Ontology Term

Identifier Name Description
transcript