WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10C.3.1 Sequence Name  Y57A10C.3.1
Length (nt)  1236   Chromosome Location  II: 12415527-12417614
Chromosome . Primary Identifier  II Chromosome Location . Start  12415527
Chromosome Location . End  12417614 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10C.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013281 sre-27 Y57A10C.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10C.3 Y57A10C.3 1095   II: 12415581-12415794

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10C.3.1 12415527 12417614 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71495   268   II: 12415527-12415794 Caenorhabditis elegans
Exon71496   125   II: 12415856-12415980 Caenorhabditis elegans
Exon71497   123   II: 12416028-12416150 Caenorhabditis elegans
Exon71498   157   II: 12416201-12416357 Caenorhabditis elegans
Exon71499   563   II: 12417052-12417614 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10C.3.1 12415527 12417614 -1

1 Sequence

Length
1236

1 Sequence Ontology Term

Identifier Name Description
transcript