WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10C.9a.1 Sequence Name  Y57A10C.9a.1
Length (nt)  865   Chromosome Location  II: 12433487-12435846
Chromosome . Primary Identifier  II Chromosome Location . Start  12433487
Chromosome Location . End  12435846 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10C.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013287 Y57A10C.9 Y57A10C.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10C.9a Y57A10C.9a 744   II: 12433608-12433753

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10C.9a.1 12433487 12435846 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71530   267   II: 12433487-12433753 Caenorhabditis elegans
Exon71535   184   II: 12434573-12434756 Caenorhabditis elegans
Exon71540   84   II: 12434818-12434901 Caenorhabditis elegans
Exon71545   217   II: 12434953-12435169 Caenorhabditis elegans
Exon71555   113   II: 12435734-12435846 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10C.9a.1 12433487 12435846 -1

1 Sequence

Length
865

1 Sequence Ontology Term

Identifier Name Description
transcript