WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05H5.8.1 Sequence Name  W05H5.8.1
Length (nt)  1077   Chromosome Location  II: 12450149-12451407
Chromosome . Primary Identifier  II Chromosome Location . Start  12450149
Chromosome Location . End  12451407 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05H5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043058 sre-34 W05H5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05H5.8 W05H5.8 1077   II: 12450149-12450621

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05H5.8.1 12450149 12451407 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71591   473   II: 12450149-12450621 Caenorhabditis elegans
Exon71592   157   II: 12450665-12450821 Caenorhabditis elegans
Exon71593   123   II: 12450869-12450991 Caenorhabditis elegans
Exon71594   125   II: 12451037-12451161 Caenorhabditis elegans
Exon71595   199   II: 12451209-12451407 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05H5.8.1 12450149 12451407 1

1 Sequence

Length
1077

1 Sequence Ontology Term

Identifier Name Description
transcript