WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05H5.5.1 Sequence Name  W05H5.5.1
Length (nt)  1077   Chromosome Location  II: 12451593-12452854
Chromosome . Primary Identifier  II Chromosome Location . Start  12451593
Chromosome Location . End  12452854 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05H5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012286 sre-35 W05H5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05H5.5 W05H5.5 1077   II: 12451593-12451791

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05H5.5.1 12451593 12452854 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71596   199   II: 12451593-12451791 Caenorhabditis elegans
Exon71597   125   II: 12451838-12451962 Caenorhabditis elegans
Exon71598   123   II: 12452008-12452130 Caenorhabditis elegans
Exon71599   157   II: 12452180-12452336 Caenorhabditis elegans
Exon71600   473   II: 12452382-12452854 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05H5.5.1 12451593 12452854 -1

1 Sequence

Length
1077

1 Sequence Ontology Term

Identifier Name Description
transcript