WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15A4.1.1 Sequence Name  F15A4.1.1
Length (nt)  1152   Chromosome Location  II: 12457575-12459564
Chromosome . Primary Identifier  II Chromosome Location . Start  12457575
Chromosome Location . End  12459564 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15A4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008837 sre-38 F15A4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15A4.1 F15A4.1 1098   II: 12457575-12457860

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15A4.1.1 12457575 12459564 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71611   286   II: 12457575-12457860 Caenorhabditis elegans
Exon71612   187   II: 12458263-12458449 Caenorhabditis elegans
Exon71613   157   II: 12458566-12458722 Caenorhabditis elegans
Exon71614   123   II: 12458781-12458903 Caenorhabditis elegans
Exon71615   134   II: 12459119-12459252 Caenorhabditis elegans
Exon71616   265   II: 12459300-12459564 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15A4.1.1 12457575 12459564 1

1 Sequence

Length
1152

1 Sequence Ontology Term

Identifier Name Description
transcript