WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15A4.7.1 Sequence Name  F15A4.7.1
Length (nt)  963   Chromosome Location  II: 12473706-12475234
Chromosome . Primary Identifier  II Chromosome Location . Start  12473706
Chromosome Location . End  12475234 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15A4.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005174 srg-17 F15A4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15A4.7 F15A4.7 963   II: 12473706-12473918

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15A4.7.1 12473706 12475234 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71646   213   II: 12473706-12473918 Caenorhabditis elegans
Exon71647   219   II: 12474305-12474523 Caenorhabditis elegans
Exon71648   144   II: 12474569-12474712 Caenorhabditis elegans
Exon71649   183   II: 12474761-12474943 Caenorhabditis elegans
Exon71650   83   II: 12474989-12475071 Caenorhabditis elegans
Exon71651   121   II: 12475114-12475234 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15A4.7.1 12473706 12475234 1

1 Sequence

Length
963

1 Sequence Ontology Term

Identifier Name Description
transcript