WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49C5.4 Sequence Name  F49C5.4
Length (nt)  1512   Chromosome Location  II: 12535760-12535876
Chromosome . Primary Identifier  II Chromosome Location . Start  12535760
Chromosome Location . End  12535876
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C5.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42460 NIMK-1 56.5 503 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047817
WBRNAi00015295
WBRNAi00032522

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49C5.4 12535760 12535876 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009867 nimk-1 F49C5.4 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49C5.4 12535760 12535876 1
CDS:F49C5.4 12539728 12539853 1
CDS:F49C5.4 12540000 12540137 1
CDS:F49C5.4 12540186 12540285 1
CDS:F49C5.4 12540627 12540895 1
CDS:F49C5.4 12541049 12541215 1
CDS:F49C5.4 12541307 12541643 1
CDS:F49C5.4 12542108 12542242 1
CDS:F49C5.4 12542293 12542415 1

1 Sequence

Length
1512

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49C5.4.1 F49C5.4.1 1519   II: 12535753-12542415