WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49C5.3.1 Sequence Name  F49C5.3.1
Length (nt)  1748   Chromosome Location  II: 12536503-12538691
Chromosome . Primary Identifier  II Chromosome Location . Start  12536503
Chromosome Location . End  12538691 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009866 F49C5.3 F49C5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49C5.3 F49C5.3 1656   II: 12536503-12536532

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49C5.3.1 12536503 12538691 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71787   30   II: 12536503-12536532 Caenorhabditis elegans
Exon71788   640   II: 12536579-12537218 Caenorhabditis elegans
Exon71789   101   II: 12537271-12537371 Caenorhabditis elegans
Exon71790   114   II: 12537425-12537538 Caenorhabditis elegans
Exon71791   252   II: 12537582-12537833 Caenorhabditis elegans
Exon71792   112   II: 12537878-12537989 Caenorhabditis elegans
Exon71793   73   II: 12538041-12538113 Caenorhabditis elegans
Exon71794   105   II: 12538169-12538273 Caenorhabditis elegans
Exon71795   159   II: 12538321-12538479 Caenorhabditis elegans
Exon71796   162   II: 12538530-12538691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49C5.3.1 12536503 12538691 1

1 Sequence

Length
1748

1 Sequence Ontology Term

Identifier Name Description
transcript