WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49C5.16.1 Sequence Name  F49C5.16.1
Length (nt)  273   Chromosome Location  II: 12547847-12548249
Chromosome . Primary Identifier  II Chromosome Location . Start  12547847
Chromosome Location . End  12548249 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C5.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00305130 F49C5.16 F49C5.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49C5.16 F49C5.16 273   II: 12547847-12547878

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49C5.16.1 12547847 12548249 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71825   32   II: 12547847-12547878 Caenorhabditis elegans
Exon71826   91   II: 12547924-12548014 Caenorhabditis elegans
Exon71827   107   II: 12548056-12548162 Caenorhabditis elegans
Exon71828   43   II: 12548207-12548249 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49C5.16.1 12547847 12548249 1

1 Sequence

Length
273

1 Sequence Ontology Term

Identifier Name Description
transcript