WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49C5.11c.1 Sequence Name  F49C5.11c.1
Length (nt)  513   Chromosome Location  II: 12555909-12556955
Chromosome . Primary Identifier  II Chromosome Location . Start  12555909
Chromosome Location . End  12556955 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C5.11c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044163 F49C5.11 F49C5.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49C5.11c F49C5.11c 513   II: 12555909-12556058

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49C5.11c.1 12555909 12556955 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71831   150   II: 12555909-12556058 Caenorhabditis elegans
Exon71834   40   II: 12556418-12556457 Caenorhabditis elegans
Exon71835   79   II: 12556498-12556576 Caenorhabditis elegans
Exon71840   91   II: 12556625-12556715 Caenorhabditis elegans
Exon71843   104   II: 12556759-12556862 Caenorhabditis elegans
Exon71844   49   II: 12556907-12556955 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49C5.11c.1 12555909 12556955 1

1 Sequence

Length
513

1 Sequence Ontology Term

Identifier Name Description
transcript