WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49C5.12.1 Sequence Name  F49C5.12.1
Length (nt)  672   Chromosome Location  II: 12557808-12560310
Chromosome . Primary Identifier  II Chromosome Location . Start  12557808
Chromosome Location . End  12560310 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C5.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00184956 F49C5.12 F49C5.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49C5.12 F49C5.12 402   II: 12558027-12558137

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49C5.12.1 12557808 12560310 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71847   330   II: 12557808-12558137 Caenorhabditis elegans
Exon71848   135   II: 12558181-12558315 Caenorhabditis elegans
Exon71849   111   II: 12559268-12559378 Caenorhabditis elegans
Exon71850   96   II: 12560215-12560310 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49C5.12.1 12557808 12560310 -1

1 Sequence

Length
672

1 Sequence Ontology Term

Identifier Name Description
transcript