WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38E10A.7 Sequence Name  Y38E10A.7
Length (nt)  861   Chromosome Location  II: 12605976-12606163
Chromosome . Primary Identifier  II Chromosome Location . Start  12605976
Chromosome Location . End  12606163
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38E10A.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21587 LIPS-15 29.9 286 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056028
WBRNAi00020278

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38E10A.7 12605976 12606163 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012585 lips-15 Y38E10A.7 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38E10A.7 12605976 12606163 1
CDS:Y38E10A.7 12606212 12606685 1
CDS:Y38E10A.7 12606737 12606857 1
CDS:Y38E10A.7 12606914 12606991 1

1 Sequence

Length
861

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38E10A.7.1 Y38E10A.7.1 2487   II: 12604386-12607027