WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38E10A.11.1 Sequence Name  Y38E10A.11.1
Length (nt)  1448   Chromosome Location  II: 12612518-12614023
Chromosome . Primary Identifier  II Chromosome Location . Start  12612518
Chromosome Location . End  12614023 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38E10A.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012589 nspe-4 Y38E10A.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38E10A.11 Y38E10A.11 216   II: 12613666-12613822

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.11.1 12612518 12614023 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71943   1305   II: 12612518-12613822 Caenorhabditis elegans
Exon71944   143   II: 12613881-12614023 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.11.1 12612518 12614023 1

1 Sequence

Length
1448

1 Sequence Ontology Term

Identifier Name Description
transcript