WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38E10A.15.1 Sequence Name  Y38E10A.15.1
Length (nt)  338   Chromosome Location  II: 12627187-12627570
Chromosome . Primary Identifier  II Chromosome Location . Start  12627187
Chromosome Location . End  12627570 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38E10A.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012593 nspe-7 Y38E10A.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38E10A.15 Y38E10A.15 225   II: 12627207-12627369

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.15.1 12627187 12627570 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71956   183   II: 12627187-12627369 Caenorhabditis elegans
Exon71957   155   II: 12627416-12627570 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.15.1 12627187 12627570 1

1 Sequence

Length
338

1 Sequence Ontology Term

Identifier Name Description
transcript