WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38E10A.28.1 Sequence Name  Y38E10A.28.1
Length (nt)  890   Chromosome Location  II: 12629687-12630630
Chromosome . Primary Identifier  II Chromosome Location . Start  12629687
Chromosome Location . End  12630630 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38E10A.28.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044034 Y38E10A.28 Y38E10A.28 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38E10A.28 Y38E10A.28 759   II: 12629734-12630048

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.28.1 12629687 12630630 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71960   362   II: 12629687-12630048 Caenorhabditis elegans
Exon71961   528   II: 12630103-12630630 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.28.1 12629687 12630630 1

1 Sequence

Length
890

1 Sequence Ontology Term

Identifier Name Description
transcript