WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38E10A.18.1 Sequence Name  Y38E10A.18.1
Length (nt)  1138   Chromosome Location  II: 12636678-12638491
Chromosome . Primary Identifier  II Chromosome Location . Start  12636678
Chromosome Location . End  12638491 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38E10A.18.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012596 nhr-234 Y38E10A.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38E10A.18 Y38E10A.18 1074   II: 12636699-12636723

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.18.1 12636678 12638491 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71970   46   II: 12636678-12636723 Caenorhabditis elegans
Exon71971   153   II: 12636928-12637080 Caenorhabditis elegans
Exon71972   66   II: 12637125-12637190 Caenorhabditis elegans
Exon71973   269   II: 12637244-12637512 Caenorhabditis elegans
Exon71974   215   II: 12637576-12637790 Caenorhabditis elegans
Exon71975   202   II: 12637835-12638036 Caenorhabditis elegans
Exon71978   75   II: 12638255-12638329 Caenorhabditis elegans
Exon71979   112   II: 12638380-12638491 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.18.1 12636678 12638491 1

1 Sequence

Length
1138

1 Sequence Ontology Term

Identifier Name Description
transcript