WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38E10A.19.1 Sequence Name  Y38E10A.19.1
Length (nt)  862   Chromosome Location  II: 12640670-12642917
Chromosome . Primary Identifier  II Chromosome Location . Start  12640670
Chromosome Location . End  12642917 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38E10A.19.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012597 nhr-235 Y38E10A.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38E10A.19 Y38E10A.19 654   II: 12640701-12640796

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.19.1 12640670 12642917 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71980   127   II: 12640670-12640796 Caenorhabditis elegans
Exon71981   218   II: 12641225-12641442 Caenorhabditis elegans
Exon71982   199   II: 12641492-12641690 Caenorhabditis elegans
Exon71983   75   II: 12642543-12642617 Caenorhabditis elegans
Exon71984   243   II: 12642675-12642917 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.19.1 12640670 12642917 1

1 Sequence

Length
862

1 Sequence Ontology Term

Identifier Name Description
transcript