WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38E10A.22b.1 Sequence Name  Y38E10A.22b.1
Length (nt)  918   Chromosome Location  II: 12673335-12676189
Chromosome . Primary Identifier  II Chromosome Location . Start  12673335
Chromosome Location . End  12676189 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38E10A.22b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012600 Y38E10A.22 Y38E10A.22 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38E10A.22b Y38E10A.22b 918   II: 12673335-12673767

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.22b.1 12673335 12676189 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72013   433   II: 12673335-12673767 Caenorhabditis elegans
Exon72015   151   II: 12674695-12674845 Caenorhabditis elegans
Exon72018   334   II: 12675856-12676189 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.22b.1 12673335 12676189 -1

1 Sequence

Length
918

1 Sequence Ontology Term

Identifier Name Description
transcript