WormMine: Gene WBGene00189967

• WormBase Gene ID: WBGene00189967
• Gene Name: Y46G5A.t1
• Sequence Name: Y46G5A.t1
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by ogt-1 based on RNA-seq studies.
• Biotype: SO:0001272
• Genetic Position: :±
• Length (nt): 71

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00189967

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y46G5A.t1	Y46G5A.t1	71	II: 12728756-12728826

Other

0 CDSs

18 RNAi Result

• WBRNAi00072730
• WBRNAi00074983
• WBRNAi00083718
• WBRNAi00083614
• WBRNAi00074980
• WBRNAi00072729
• WBRNAi00072731
• WBRNAi00037141
• WBRNAi00074984
• WBRNAi00083807
• WBRNAi00074981
• WBRNAi00074982
• WBRNAi00074985
• WBRNAi00074986
• WBRNAi00075527
• WBRNAi00074987
• WBRNAi00075526
• WBRNAi00083550

6 Allele

• gk963801
• gk963053
• gk962684
• gk964116
• gk157899
• ve734

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: WBGene00189967
• Start: 12728756
• End: 12728826
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00189967
• Start: 12728756
• End: 12728826
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 71

1 Sequence Ontology Term