WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46G5A.10.1 Sequence Name  Y46G5A.10.1
Length (nt)  2303   Chromosome Location  II: 12760797-12767228
Chromosome . Primary Identifier  II Chromosome Location . Start  12760797
Chromosome Location . End  12767228 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012901 cnp-2 Y46G5A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46G5A.10 Y46G5A.10 2199   II: 12760821-12760848

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.10.1 12760797 12767228 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72130   52   II: 12760797-12760848 Caenorhabditis elegans
Exon72131   184   II: 12761256-12761439 Caenorhabditis elegans
Exon72132   103   II: 12761775-12761877 Caenorhabditis elegans
Exon72133   73   II: 12762654-12762726 Caenorhabditis elegans
Exon72134   422   II: 12762770-12763191 Caenorhabditis elegans
Exon72135   80   II: 12763488-12763567 Caenorhabditis elegans
Exon72136   270   II: 12763623-12763892 Caenorhabditis elegans
Exon72137   204   II: 12764940-12765143 Caenorhabditis elegans
Exon72138   63   II: 12765191-12765253 Caenorhabditis elegans
Exon72139   87   II: 12765299-12765385 Caenorhabditis elegans
Exon72140   45   II: 12765757-12765801 Caenorhabditis elegans
Exon72141   45   II: 12765846-12765890 Caenorhabditis elegans
Exon72142   75   II: 12765942-12766016 Caenorhabditis elegans
Exon72143   45   II: 12766069-12766113 Caenorhabditis elegans
Exon72144   51   II: 12766161-12766211 Caenorhabditis elegans
Exon72145   66   II: 12766259-12766324 Caenorhabditis elegans
Exon72146   162   II: 12766368-12766529 Caenorhabditis elegans
Exon72147   54   II: 12766574-12766627 Caenorhabditis elegans
Exon72148   37   II: 12766950-12766986 Caenorhabditis elegans
Exon72149   185   II: 12767044-12767228 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.10.1 12760797 12767228 1

1 Sequence

Length
2303

1 Sequence Ontology Term

Identifier Name Description
transcript