WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46G5A.13.1 Sequence Name  Y46G5A.13.1
Length (nt)  2553   Chromosome Location  II: 12768686-12774414
Chromosome . Primary Identifier  II Chromosome Location . Start  12768686
Chromosome Location . End  12774414 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012904 tiar-2 Y46G5A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46G5A.13 Y46G5A.13 1305   II: 12768742-12768866

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.13.1 12768686 12774414 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72154   181   II: 12768686-12768866 Caenorhabditis elegans
Exon72155   97   II: 12768928-12769024 Caenorhabditis elegans
Exon72156   96   II: 12769072-12769167 Caenorhabditis elegans
Exon72157   178   II: 12769257-12769434 Caenorhabditis elegans
Exon72158   306   II: 12770282-12770587 Caenorhabditis elegans
Exon72159   185   II: 12771777-12771961 Caenorhabditis elegans
Exon72160   1510   II: 12772905-12774414 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.13.1 12768686 12774414 1

1 Sequence

Length
2553

1 Sequence Ontology Term

Identifier Name Description
transcript