WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46G5A.26a.1 Sequence Name  Y46G5A.26a.1
Length (nt)  1657   Chromosome Location  II: 12836480-12840157
Chromosome . Primary Identifier  II Chromosome Location . Start  12836480
Chromosome Location . End  12840157 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.26a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012915 lgc-35 Y46G5A.26 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46G5A.26a Y46G5A.26a 1548   II: 12836568-12836624

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.26a.1 12836480 12840157 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72280   145   II: 12836480-12836624 Caenorhabditis elegans
Exon72282   140   II: 12836682-12836821 Caenorhabditis elegans
Exon72284   101   II: 12836887-12836987 Caenorhabditis elegans
Exon72286   117   II: 12837366-12837482 Caenorhabditis elegans
Exon72289   82   II: 12838067-12838148 Caenorhabditis elegans
Exon72290   100   II: 12838193-12838292 Caenorhabditis elegans
Exon72291   140   II: 12838374-12838513 Caenorhabditis elegans
Exon72292   138   II: 12838903-12839040 Caenorhabditis elegans
Exon72293   119   II: 12839093-12839211 Caenorhabditis elegans
Exon72294   345   II: 12839450-12839794 Caenorhabditis elegans
Exon72295   131   II: 12839864-12839994 Caenorhabditis elegans
Exon72296   99   II: 12840059-12840157 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.26a.1 12836480 12840157 -1

1 Sequence

Length
1657

1 Sequence Ontology Term

Identifier Name Description
transcript