WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35C5.3.1 Sequence Name  F35C5.3.1
Length (nt)  1285   Chromosome Location  II: 12888771-12890553
Chromosome . Primary Identifier  II Chromosome Location . Start  12888771
Chromosome Location . End  12890553 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35C5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009391 F35C5.3 F35C5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35C5.3 F35C5.3 1185   II: 12888778-12888843

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35C5.3.1 12888771 12890553 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72346   73   II: 12888771-12888843 Caenorhabditis elegans
Exon72347   87   II: 12888891-12888977 Caenorhabditis elegans
Exon72348   57   II: 12889023-12889079 Caenorhabditis elegans
Exon72349   645   II: 12889127-12889771 Caenorhabditis elegans
Exon72350   54   II: 12889824-12889877 Caenorhabditis elegans
Exon72351   45   II: 12889933-12889977 Caenorhabditis elegans
Exon72352   42   II: 12890028-12890069 Caenorhabditis elegans
Exon72353   36   II: 12890117-12890152 Caenorhabditis elegans
Exon72354   33   II: 12890200-12890232 Caenorhabditis elegans
Exon72355   66   II: 12890284-12890349 Caenorhabditis elegans
Exon72356   147   II: 12890407-12890553 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35C5.3.1 12888771 12890553 1

1 Sequence

Length
1285

1 Sequence Ontology Term

Identifier Name Description
transcript