WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35C5.8.1 Sequence Name  F35C5.8.1
Length (nt)  1165   Chromosome Location  II: 12901325-12903336
Chromosome . Primary Identifier  II Chromosome Location . Start  12901325
Chromosome Location . End  12903336 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35C5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009396 clec-65 F35C5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35C5.8 F35C5.8 1119   II: 12901332-12901362

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35C5.8.1 12901325 12903336 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72389   38   II: 12901325-12901362 Caenorhabditis elegans
Exon72390   227   II: 12901409-12901635 Caenorhabditis elegans
Exon72392   104   II: 12901693-12901796 Caenorhabditis elegans
Exon72393   284   II: 12901849-12902132 Caenorhabditis elegans
Exon72394   198   II: 12902338-12902535 Caenorhabditis elegans
Exon72395   110   II: 12902919-12903028 Caenorhabditis elegans
Exon72396   72   II: 12903082-12903153 Caenorhabditis elegans
Exon72397   132   II: 12903205-12903336 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35C5.8.1 12901325 12903336 1

1 Sequence

Length
1165

1 Sequence Ontology Term

Identifier Name Description
transcript