WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F35C5.12.1 Sequence Name  F35C5.12.1
Length (nt)  515   Chromosome Location  II: 12910229-12914564
Chromosome . Primary Identifier  II Chromosome Location . Start  12910229
Chromosome Location . End  12914564 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35C5.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009400 spig-16 F35C5.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35C5.12 F35C5.12 381   II: 12910305-12910442

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35C5.12.1 12910229 12914564 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72411   214   II: 12910229-12910442 Caenorhabditis elegans
Exon72412   88   II: 12910490-12910577 Caenorhabditis elegans
Exon72413   102   II: 12911205-12911306 Caenorhabditis elegans
Exon72414   111   II: 12914454-12914564 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35C5.12.1 12910229 12914564 -1

1 Sequence

Length
515

1 Sequence Ontology Term

Identifier Name Description
transcript