WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G1.6.1 Sequence Name  F58G1.6.1
Length (nt)  1332   Chromosome Location  II: 12940101-12943928
Chromosome . Primary Identifier  II Chromosome Location . Start  12940101
Chromosome Location . End  12943928 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010268 arrd-10 F58G1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G1.6 F58G1.6 1206   II: 12940110-12940169

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G1.6.1 12940101 12943928 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72474   69   II: 12940101-12940169 Caenorhabditis elegans
Exon72475   72   II: 12940375-12940446 Caenorhabditis elegans
Exon72476   102   II: 12940501-12940602 Caenorhabditis elegans
Exon72477   120   II: 12940652-12940771 Caenorhabditis elegans
Exon72478   141   II: 12941783-12941923 Caenorhabditis elegans
Exon72479   67   II: 12942469-12942535 Caenorhabditis elegans
Exon72480   121   II: 12942817-12942937 Caenorhabditis elegans
Exon72481   127   II: 12943177-12943303 Caenorhabditis elegans
Exon72482   105   II: 12943350-12943454 Caenorhabditis elegans
Exon72483   408   II: 12943521-12943928 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G1.6.1 12940101 12943928 1

1 Sequence

Length
1332

1 Sequence Ontology Term

Identifier Name Description
transcript