WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38F1A.2 Sequence Name  Y38F1A.2
Length (nt)  852   Chromosome Location  II: 12954980-12955031
Chromosome . Primary Identifier  II Chromosome Location . Start  12954980
Chromosome Location . End  12955031
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F1A.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21607 Y38F1A.2 32.7 283 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056033
WBRNAi00076771
WBRNAi00036853

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38F1A.2 12954980 12955031 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012606 Y38F1A.2 Y38F1A.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38F1A.2 12954980 12955031 1
CDS:Y38F1A.2 12955472 12955622 1
CDS:Y38F1A.2 12955797 12955869 1
CDS:Y38F1A.2 12955928 12956027 1
CDS:Y38F1A.2 12956083 12956159 1
CDS:Y38F1A.2 12956401 12956523 1
CDS:Y38F1A.2 12957562 12957650 1
CDS:Y38F1A.2 12957696 12957882 1

1 Sequence

Length
852

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38F1A.2.1 Y38F1A.2.1 1015   II: 12954958-12958023