WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18A11.5a.1 Sequence Name  F18A11.5a.1
Length (nt)  798   Chromosome Location  II: 13010496-13012525
Chromosome . Primary Identifier  II Chromosome Location . Start  13010496
Chromosome Location . End  13012525 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18A11.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008932 F18A11.5 F18A11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18A11.5a F18A11.5a 696   II: 13010553-13010654

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18A11.5a.1 13010496 13012525 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72611   159   II: 13010496-13010654 Caenorhabditis elegans
Exon72612   139   II: 13010766-13010904 Caenorhabditis elegans
Exon72615   158   II: 13011011-13011168 Caenorhabditis elegans
Exon72618   165   II: 13011222-13011386 Caenorhabditis elegans
Exon72621   111   II: 13012303-13012413 Caenorhabditis elegans
Exon72624   66   II: 13012460-13012525 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18A11.5a.1 13010496 13012525 -1

1 Sequence

Length
798

1 Sequence Ontology Term

Identifier Name Description
transcript