WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y81G3A.1.1 Sequence Name  Y81G3A.1.1
Length (nt)  1263   Chromosome Location  II: 13082223-13083926
Chromosome . Primary Identifier  II Chromosome Location . Start  13082223
Chromosome Location . End  13083926 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y81G3A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013590 Y81G3A.1 Y81G3A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y81G3A.1 Y81G3A.1 732   II: 13082504-13082762

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y81G3A.1.1 13082223 13083926 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72807   540   II: 13082223-13082762 Caenorhabditis elegans
Exon72808   287   II: 13083094-13083380 Caenorhabditis elegans
Exon72809   129   II: 13083438-13083566 Caenorhabditis elegans
Exon72810   307   II: 13083620-13083926 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y81G3A.1.1 13082223 13083926 -1

1 Sequence

Length
1263

1 Sequence Ontology Term

Identifier Name Description
transcript