WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y81G3A.5b.1 Sequence Name  Y81G3A.5b.1
Length (nt)  537   Chromosome Location  II: 13096009-13096602
Chromosome . Primary Identifier  II Chromosome Location . Start  13096009
Chromosome Location . End  13096602 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y81G3A.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000661 col-86 Y81G3A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y81G3A.5b Y81G3A.5b 537   II: 13096009-13096117

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y81G3A.5b.1 13096009 13096602 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72843   109   II: 13096009-13096117 Caenorhabditis elegans
Exon72844   428   II: 13096175-13096602 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y81G3A.5b.1 13096009 13096602 -1

1 Sequence

Length
537

1 Sequence Ontology Term

Identifier Name Description
transcript