WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Hide

Oops!

http://intermine.wormbase.org/tools/wormmine/service/ is incorrect

mRNA :

WormMine ID  Transcript:F29C12.3a.1 Sequence Name  F29C12.3a.1
Length (nt)  5017   Chromosome Location  II: 13098239-13116810
Chromosome . Primary Identifier  II Chromosome Location . Start  13098239
Chromosome Location . End  13116810 Method  Coding_transcript
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29C12.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009245 rict-1 F29C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29C12.3a F29C12.3a 4737   II: 13098510-13098648

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29C12.3a.1 13098239 13116810 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72847   410   II: 13098239-13098648 Caenorhabditis elegans
Exon72850   103   II: 13099736-13099838 Caenorhabditis elegans
Exon72853   325   II: 13099910-13100234 Caenorhabditis elegans
Exon72856   436   II: 13101467-13101902 Caenorhabditis elegans
Exon72859   203   II: 13102710-13102912 Caenorhabditis elegans
Exon72862   1051   II: 13103746-13104796 Caenorhabditis elegans
Exon72876   137   II: 13110187-13110323 Caenorhabditis elegans
Exon72878   189   II: 13111222-13111410 Caenorhabditis elegans
Exon72880   508   II: 13111470-13111977 Caenorhabditis elegans
Exon72882   418   II: 13112950-13113367 Caenorhabditis elegans
Exon72884   287   II: 13113871-13114157 Caenorhabditis elegans
Exon72886   285   II: 13114711-13114995 Caenorhabditis elegans
Exon72888   90   II: 13115057-13115146 Caenorhabditis elegans
Exon72890   267   II: 13116121-13116387 Caenorhabditis elegans
Exon72892   205   II: 13116446-13116650 Caenorhabditis elegans
Exon72895   103   II: 13116708-13116810 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29C12.3a.1 13098239 13116810 -1

1 Sequence

Length
5017

1 Sequence Ontology Term

Identifier Name Description
transcript