WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29C12.3b.1 Sequence Name  F29C12.3b.1
Length (nt)  5008   Chromosome Location  II: 13098250-13116806
Chromosome . Primary Identifier  II Chromosome Location . Start  13098250
Chromosome Location . End  13116806 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29C12.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009245 rict-1 F29C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29C12.3b F29C12.3b 4743   II: 13098510-13098648

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29C12.3b.1 13098250 13116806 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72848   399   II: 13098250-13098648 Caenorhabditis elegans
Exon72851   103   II: 13099736-13099838 Caenorhabditis elegans
Exon72854   325   II: 13099910-13100234 Caenorhabditis elegans
Exon72857   436   II: 13101467-13101902 Caenorhabditis elegans
Exon72860   203   II: 13102710-13102912 Caenorhabditis elegans
Exon72863   1051   II: 13103746-13104796 Caenorhabditis elegans
Exon72877   137   II: 13110187-13110323 Caenorhabditis elegans
Exon72879   189   II: 13111222-13111410 Caenorhabditis elegans
Exon72881   508   II: 13111470-13111977 Caenorhabditis elegans
Exon72883   418   II: 13112950-13113367 Caenorhabditis elegans
Exon72885   293   II: 13113871-13114163 Caenorhabditis elegans
Exon72887   285   II: 13114711-13114995 Caenorhabditis elegans
Exon72889   90   II: 13115057-13115146 Caenorhabditis elegans
Exon72891   267   II: 13116121-13116387 Caenorhabditis elegans
Exon72893   205   II: 13116446-13116650 Caenorhabditis elegans
Exon72894   99   II: 13116708-13116806 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29C12.3b.1 13098250 13116806 -1

1 Sequence

Length
5008

1 Sequence Ontology Term

Identifier Name Description
transcript