WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29C12.1a.1 Sequence Name  F29C12.1a.1
Length (nt)  1959   Chromosome Location  II: 13108019-13110169
Chromosome . Primary Identifier  II Chromosome Location . Start  13108019
Chromosome Location . End  13110169 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29C12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004120 pqn-32 F29C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29C12.1a F29C12.1a 1779   II: 13108023-13108205

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29C12.1a.1 13108019 13110169 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72865   187   II: 13108019-13108205 Caenorhabditis elegans
Exon72867   123   II: 13108256-13108378 Caenorhabditis elegans
Exon72869   1083   II: 13108423-13109505 Caenorhabditis elegans
Exon72871   135   II: 13109553-13109687 Caenorhabditis elegans
Exon72873   431   II: 13109739-13110169 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29C12.1a.1 13108019 13110169 1

1 Sequence

Length
1959

1 Sequence Ontology Term

Identifier Name Description
transcript