WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29C12.5.1 Sequence Name  F29C12.5.1
Length (nt)  1825   Chromosome Location  II: 13123020-13125189
Chromosome . Primary Identifier  II Chromosome Location . Start  13123020
Chromosome Location . End  13125189 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29C12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009247 bath-45 F29C12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29C12.5 F29C12.5 1407   II: 13123038-13123150

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29C12.5.1 13123020 13125189 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72902   131   II: 13123020-13123150 Caenorhabditis elegans
Exon72903   379   II: 13123202-13123580 Caenorhabditis elegans
Exon72904   148   II: 13123629-13123776 Caenorhabditis elegans
Exon72905   152   II: 13123827-13123978 Caenorhabditis elegans
Exon72906   168   II: 13124029-13124196 Caenorhabditis elegans
Exon72907   139   II: 13124250-13124388 Caenorhabditis elegans
Exon72908   152   II: 13124431-13124582 Caenorhabditis elegans
Exon72909   556   II: 13124634-13125189 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29C12.5.1 13123020 13125189 1

1 Sequence

Length
1825

1 Sequence Ontology Term

Identifier Name Description
transcript